Albert Jelke Kooistra

Albert Jelke Kooistra

Assistant professor

Member of:


    1. 3D-e-Chem : Structural Cheminformatics Workflows for Computer-Aided Drug Discovery. / Kooistra, Albert J.; Vass, Márton; McGuire, Ross; Leurs, Rob; de Esch, Iwan J.P.; Vriend, Gert; Verhoeven, Stefan; de Graaf, Chris.

      In: ChemMedChem, Vol. 13, No. 6, 20.03.2018, p. 614-626.

      Research output: Contribution to journalJournal articleResearchpeer-review

    2. 3D-e-Chem-VM : Structural Cheminformatics Research Infrastructure in a Freely Available Virtual Machine. / McGuire, Ross; Verhoeven, Stefan; Vass, Márton; Vriend, Gerrit; De Esch, Iwan J.P.; Lusher, Scott J.; Leurs, Rob; Ridder, Lars; Kooistra, Albert J.; Ritschel, Tina; De Graaf, Chris.

      In: Journal of Chemical Information and Modeling, Vol. 57, No. 2, 27.02.2017, p. 115-121.

      Research output: Contribution to journalJournal articleResearchpeer-review

    3. Published

      A Structural Framework for GPCR Chemogenomics : What’s In a Residue Number? / Vass, Márton; Kooistra, Albert J.; Verhoeven, Stefan; Gloriam, David; de Esch, Iwan J.P.; de Graaf, Chris.

      Methods in Molecular Biology. Humana Press, 2018. p. 73-113 (Methods in Molecular Biology, Vol. 1705).

      Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

    4. A structural chemogenomics analysis of aminergic GPCRs : Lessons for histamine receptor ligand design. / Kooistra, A. J.; Kuhne, S.; De Esch, I. J.P.; Leurs, R.; De Graaf, C.

      In: British Journal of Pharmacology, Vol. 170, No. 1, 01.09.2013, p. 101-126.

      Research output: Contribution to journalJournal articleResearchpeer-review

    5. Published

      Aminergic GPCR-Ligand Interactions: A Chemical and Structural Map of Receptor Mutation Data. / Vass, M.; Podlewska, S.; De Esch, I.J.P.; Bojarski, A.J.; Leurs, R.; Kooistra, A.J.; De Graaf, C.

      In: Journal of Medicinal Chemistry, Vol. 62, No. 8, 2019, p. 3784-3839.

      Research output: Contribution to journalJournal articleResearchpeer-review

    6. Analyzing multitarget activity landscapes using protein-ligand interaction fingerprints : Interaction cliffs. / Méndez-Lucio, Oscar; Kooistra, Albert J.; Graaf, Chris De; Bender, Andreas; Medina-Franco, José L.

      In: Journal of Chemical Information and Modeling, Vol. 55, No. 2, 23.02.2015, p. 251-262.

      Research output: Contribution to journalJournal articleResearchpeer-review

    7. Chemical Diversity in the G Protein-Coupled Receptor Superfamily. / Vass, Márton; Kooistra, Albert J.; Yang, Dehua; Stevens, Raymond C.; Wang, Ming Wei; de Graaf, Chris.

      In: Trends in Pharmacological Sciences, Vol. 39, No. 5, 01.05.2018, p. 494-512.

      Research output: Contribution to journalReviewResearchpeer-review

    8. Combinatorial consensus scoring for ligand-based virtual fragment screening : A comparative case study for serotonin 5-HT3A, histamine H1, and Histamine H4 receptors. / Schultes, Sabine; Kooistra, Albert J.; Vischer, Henry F.; Nijmeijer, Saskia; Haaksma, Eric E.J.; Leurs, Rob; De Esch, Iwan J.P.; De Graaf, Chris.

      In: Journal of Chemical Information and Modeling, Vol. 55, No. 5, 26.05.2015, p. 1030-1034.

      Research output: Contribution to journalJournal articleResearchpeer-review

    9. Crystal structure-based virtual screening for fragment-like ligands of the human histamine H 1 receptor. / De Graaf, Chris; Kooistra, Albert J.; Vischer, Henry F.; Katritch, Vsevolod; Kuijer, Martien; Shiroishi, Mitsunori; Iwata, So; Shimamura, Tatsuro; Stevens, Raymond C.; De Esch, Iwan J P; Leurs, Rob.

      In: Journal of Medicinal Chemistry, Vol. 54, No. 23, 08.12.2011, p. 8195-8206.

      Research output: Contribution to journalJournal articleResearchpeer-review

    10. Development of novel fluorescent histamine H1-receptor antagonists to study ligand-binding kinetics in living cells. / Stoddart, Leigh A.; Vernall, Andrea J.; Bouzo-Lorenzo, Monica; Bosma, Reggie; Kooistra, Albert J.; De Graaf, Chris; Vischer, Henry F.; Leurs, Rob; Briddon, Stephen J.; Kellam, Barrie; Hill, Stephen J.

      In: Scientific Reports, Vol. 8, No. 1, 1572, 01.12.2018.

      Research output: Contribution to journalJournal articleResearchpeer-review

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